#########################################################################
#                                                                       #
# PyMol Script to render HIV protease with bound inhibitor              #
#                                                                       #
# Kalju Kahn, UCSB, 2004                                                #
#                                                                       #
#########################################################################

hide

# General style
set sphere_scale, 0.27

# Show perotein dimer
select prot, (chain a or chain b)
color slate, chain a
color wheat, chain b
show cartoon, prot
cmd.disable('prot')

# Show bound inhibitor
select inh, resn rit
show sticks, inh
show spheres, inh
color yellowgreen, (elem c and inh)

cmd.set('ray_texture',5)
util.performance(0)
rebuild

# Orientat to show twofold symmetry
set_view (\
    0.088694111,   -0.528918743,   -0.844028950,\
   -0.532341421,   -0.741366684,    0.408648372,\
   -0.841875136,    0.413067490,   -0.347315937,\
   -0.000072280,   -0.000038765, -131.358978271,\
   15.521452904,   25.669956207,    5.686686039,\
   96.219177246,  176.755630493,    0.000000000 )