select active, (resi 554,553,650,551,581,46)
select sub, resi 825
hide
show sticks, active
cmd.enable('active')
cmd.disable('active')
cmd.disable('sub')
cmd.label('''(name ca+C1*+C1' and (byres(active)))''','''"%s-%s"%(resn,resi)''')
select active, (resi 554,553,550,551,581,46)
hide sticks, resi 650
hide
show sticks, active
show sticks, sub
set stick_radius=0.15
set sphere_scale=0.2
hide sticks, elem h and neighbor elem c
util.cbab("sub")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13298)")
h_add lb
select n, lb
show sphere, n
cmd.disable('n')
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13314)")
unbond
h_add, n
h_add n
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`13323))) and not (((1JZQ_Ile_tRNA_syn_H`13323)) in (lb)))")
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13323)")
remove, lb
remove lb
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13299)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13291)")
bond
cmd.delete("pkchain")
cmd.delete("pkfrag2")
cmd.delete("pkfrag1")
cmd.delete("pk2")
cmd.delete("pk1")
cmd.delete("lb")
cmd.delete("rb")
hide sphere, n
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13321)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`767)")
dist
cmd.label('''(name ca+C1*+C1' and (byres(active)))''','''"%s-%s"%(resn,resi)''')
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`8941)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13315)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`9374)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13295)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`8893)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13319)")
dist
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`13320))) and not (((1JZQ_Ile_tRNA_syn_H`13320)) in (lb)))")
cmd.delete("rb")
cmd.delete("lb")
cmd.disable('dist04')
cmd.delete("dist04")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13319)")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`13320))) and not (((1JZQ_Ile_tRNA_syn_H`13320)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`13320))) and not (((1JZQ_Ile_tRNA_syn_H`13320)) in (lb)))")
h_add lb
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13315)")
h_add lb
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`8877)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13324)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`8893)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13319)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`8918)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13320)")
dist
hide label
cmd.disable('dist07')
cmd.origin("dist07")
cmd.delete("rb")
cmd.delete("lb")
cmd.enable('dist07')
cmd.disable('dist07')
cmd.enable('dist07')
cmd.disable('dist07')
cmd.enable('dist07')
cmd.disable('dist07')
cmd.delete("dist07")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13323)")
remove lb
cmd.disable('dist06')
cmd.enable('dist06')
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`13319))) and not (((1JZQ_Ile_tRNA_syn_H`13319)) in (lb)))")
h_add lb
show sphere, lb
select o, lb
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13300)")
unbond
h_add lb
cmd.delete("rb")
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13325)")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`13323))) and not (((1JZQ_Ile_tRNA_syn_H`13323)) in (lb)))")
remove lb
h_add lb
h_add o
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13323)")
remove lb
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13319)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13313)")
bond
cmd.delete("pkchain")
cmd.delete("pkfrag2")
cmd.delete("pkfrag1")
cmd.delete("pk2")
cmd.delete("pk1")
cmd.delete("rb")
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13324)")
select h, lb
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`13319)")
unbond
dist
cmd.delete("dist08")
translate [1.8,0,0],h
_ set_view (\
_    -0.096056081,    0.430091649,    0.897661269,\
_     0.935167491,   -0.269881696,    0.229385838,\
_     0.340908587,    0.861501336,   -0.376290113,\
_     0.000095812,    0.000083721,  -21.519828796,\
_   -26.021009445,    4.002619743,  -26.439527512,\
_     7.600016594,  124.201698303,    0.000000000 )
dist
cmd.delete("dist09")
cmd.enable('rb')
cmd.disable('rb')
bond
cmd.delete("pkchain")
cmd.delete("pkfrag2")
cmd.delete("pkfrag1")
cmd.delete("pk2")
cmd.delete("pk1")
cmd.delete("rb")
cmd.delete("lb")
hide sphere, h
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`13324)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H`8918)")
dist
hide sphere
hide label
set stick_radius=0.1
cmd.delete("rb")
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`9366)")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`9365))) and not (((1JZQ_Ile_tRNA_syn_H`9365)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`9358))) and not (((1JZQ_Ile_tRNA_syn_H`9358)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`9357))) and not (((1JZQ_Ile_tRNA_syn_H`9357)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`9369))) and not (((1JZQ_Ile_tRNA_syn_H`9369)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8923))) and not (((1JZQ_Ile_tRNA_syn_H`8923)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8913))) and not (((1JZQ_Ile_tRNA_syn_H`8913)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8914))) and not (((1JZQ_Ile_tRNA_syn_H`8914)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8919))) and not (((1JZQ_Ile_tRNA_syn_H`8919)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8920))) and not (((1JZQ_Ile_tRNA_syn_H`8920)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8925))) and not (((1JZQ_Ile_tRNA_syn_H`8925)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8938))) and not (((1JZQ_Ile_tRNA_syn_H`8938)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8926))) and not (((1JZQ_Ile_tRNA_syn_H`8926)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8932))) and not (((1JZQ_Ile_tRNA_syn_H`8932)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8932))) and not (((1JZQ_Ile_tRNA_syn_H`8932)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8932))) and not (((1JZQ_Ile_tRNA_syn_H`8932)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8933))) and not (((1JZQ_Ile_tRNA_syn_H`8933)) in (lb)))")
hide sticks, lb
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`8880)")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8879))) and not (((1JZQ_Ile_tRNA_syn_H`8879)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8887))) and not (((1JZQ_Ile_tRNA_syn_H`8887)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8893))) and not (((1JZQ_Ile_tRNA_syn_H`8893)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8887))) and not (((1JZQ_Ile_tRNA_syn_H`8887)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8893))) and not (((1JZQ_Ile_tRNA_syn_H`8893)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8879))) and not (((1JZQ_Ile_tRNA_syn_H`8879)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8885))) and not (((1JZQ_Ile_tRNA_syn_H`8885)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8872))) and not (((1JZQ_Ile_tRNA_syn_H`8872)) in (lb)))")
hide sticks, lb
cmd.label('''(name ca+C1*+C1' and (byres(active)))''','''"%s-%s"%(resn,resi)''')
show sticks, resi 553
cmd.delete("lb")
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`8921)")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8922))) and not (((1JZQ_Ile_tRNA_syn_H`8922)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8924))) and not (((1JZQ_Ile_tRNA_syn_H`8924)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8923))) and not (((1JZQ_Ile_tRNA_syn_H`8923)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8913))) and not (((1JZQ_Ile_tRNA_syn_H`8913)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8919))) and not (((1JZQ_Ile_tRNA_syn_H`8919)) in (lb)))")
cmd.select('lb',"( ((lb) or ((1JZQ_Ile_tRNA_syn_H`8920))) and not (((1JZQ_Ile_tRNA_syn_H`8920)) in (lb)))")
hide sticks, lb
cmd.delete("lb")
hide label
color gray, active
color salmon, sub
color oxygen, elem o
color marine, elem n
color white, elem h
color yellowgreen, elem c and sub
color orange, elem c and sub
cmd.label('''(name ca+C1*+C1' and (byres(active)))''','''"%s-%s"%(resn,resi)''')
show sticks, resi 46
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H`774)")
hide sticks, elem h and neighbor elem c
cmd.delete("lb")
color salmon, elem c and sub
color hotpink, elem o
hide label
show sphere, sub
set sphere_scale=0.2
set sphere_scale=0.15
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H2`13321)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H2`767)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H2`8941)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H2`13320)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H2`8877)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H2`13323)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H2`8893)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H2`13316)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H2`8918)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H2`13324)")
dist
cmd.select('lb',"(1JZQ_Ile_tRNA_syn_H2`9374)")
cmd.select('rb',"(1JZQ_Ile_tRNA_syn_H2`13294)")
dist
hide label